Basic Information
Locus ID:
nbisL1-mrna-13775
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Type I inositol 1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 13065133 | 13070949 | - | nbisL1-mrna-13775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 123,793.53 Da | 42.37 | 77.72 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 581 | 925 | 4.30099E-109 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 586 | 916 | 2.8E-15 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 207 | 568 | 1.92E-22 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 558 | 947 | 4.92E-56 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 574 | 936 | 2.4E-94 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 419 | 572 | 8.5E-11 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 141 | 392 | 1.4E-9 | IPR015943 |
| SMART | SM00320 | WD40_4 | 477 | 514 | 15.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 258 | 296 | 3.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 516 | 553 | 110.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 579 | 931 | 1.4E-84 | IPR000300 |
| SMART | SM00320 | WD40_4 | 196 | 234 | 11.0 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 955 | 1114 | 8.811072 | IPR000535 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_021654896.1 | type I inositol polyphosphate 5-phosphatase 13-like isoform X2 [Hevea brasiliensis] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J7CIT7 | Endonuclease/exonuclease/phosphatase family protein isoform 7 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW16G00390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology