Basic Information
Locus ID:
nbisL1-mrna-13767
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
NEK1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000061F_pilon | 963884 | 968646 | - | nbisL1-mrna-13767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.96 | 58,427.40 Da | 52.40 | 78.17 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 74 | 5.7E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 178 | 6.4E-30 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 84 | 1.5E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 100 | 164 | 1.9E-8 | - |
| SMART | SM00220 | serkin_6 | 4 | 152 | 4.6E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 295 | 8.428824 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 440 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_006382777.2 | serine/threonine-protein kinase Nek2 isoform X3 [Populus trichocarpa] | 0 |
| A2ZMH2 | Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica OX=39946 GN=NEK2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2K2ABW9 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G051600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology