Basic Information
Locus ID:
nbisL1-mrna-13766
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001346F_pilon | 510739 | 516575 | - | nbisL1-mrna-13766 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 59,160.95 Da | 40.90 | 85.68 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 53 | 311 | 7.66378E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 56 | 312 | 1.9E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 430 | 493 | 3.0E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 358 | 418 | 5.6E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 341 | 519 | 1.62E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 337 | 1.17E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 2.1E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 496 | 1.3E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 139 | 4.0E-24 | - |
| SMART | SM00054 | efh_1 | 395 | 423 | 1.2 | IPR002048 |
| SMART | SM00054 | efh_1 | 467 | 495 | 2.2E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 54 | 312 | 1.8E-94 | IPR000719 |
| SMART | SM00054 | efh_1 | 359 | 387 | 2.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 9.0E-5 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 46.661293 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 14.150764 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 463 | 498 | 14.011288 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 16.298712 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 368 | 380 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 83 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021830318.1 | calcium-dependent protein kinase 13 [Prunus avium] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LN27 | Uncharacterized protein MANES_08G092800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology