Basic Information
Locus ID:
nbisL1-mrna-13739
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 12378289 | 12381983 | + | nbisL1-mrna-13739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 113,498.34 Da | 38.78 | 101.49 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 100 | 160 | 6.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 506 | 566 | 3.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 238 | 281 | 1.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 73 | 1.0E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 697 | 976 | 4.0E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 381 | 8.84E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 293 | 602 | 5.1E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 978 | 3.37E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 390 | 2.4E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 996 | 1.5E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 186 | 4.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 678 | 774 | 3.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 391 | 628 | 1.6E-56 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 290 | 9.0E-29 | IPR032675 |
| SMART | SM00220 | serkin_6 | 695 | 982 | 2.1E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 315 | 339 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 220 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 244 | 268 | 8.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 171 | 90.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 695 | 982 | 37.403522 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 701 | 725 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 830 | 842 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021646548.1 | receptor-like protein kinase 5 isoform X1 [Hevea brasiliensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2NFR4 | Serine-threonine protein kinase plant-type OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology