Basic Information
Locus ID:
nbisL1-mrna-13730
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000061F_pilon | 728049 | 735880 | + | nbisL1-mrna-13730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 185,720.17 Da | 40.72 | 100.06 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 298 | 399 | 1.6E-11 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 161 | 276 | 2.5E-20 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 479 | 1538 | 4.42E-25 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1198 | 1424 | 1.99E-13 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 758 | 1082 | 3.37E-15 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 144 | 419 | 4.07E-43 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 148 | 322 | 6.3E-26 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 891 | 1094 | 4.2E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 674 | 886 | 9.2E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1101 | 1429 | 3.3E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 325 | 408 | 3.9E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1468 | 1629 | 4.1E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 472 | 673 | 6.8E-19 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 358 | 372 | 4.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 627 | 643 | 4.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 247 | 261 | 4.1E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 174 | 189 | 4.1E-20 | - |
| Coils | Coil | Coil | 35 | 62 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_052302600.1 | probable disease resistance protein At4g27220 isoform X5 [Populus trichocarpa] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology