halophFGD

Basic Information

Locus ID: nbisL1-mrna-13706

Species & Taxonomic ID: Ceriops zippeliana & 413951

Genome Assembly: GCA_037897445.1

Description: Serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
000061F_pilon	585472	588425	+	nbisL1-mrna-13706

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.02	29,656.77 Da	30.64	92.51	-0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	109	176	7.3E-12	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	100	183	1.8E-18	-
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	135	157	-	IPR017441

Gene Ontology

Molecular Function:

GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G54820.1	Protein kinase superfamily protein.
RefSeq	XP_052302216.1	probable serine/threonine-protein kinase PBL7 [Populus trichocarpa]
Swiss-Prot	Q3EDL4	Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2
TrEMBL	A0A2P2JRS6	Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg19304, jg26596
Aizoaceae	Mesembryanthemum crystallinum	1	gene_12011
Amaranthaceae	Atriplex hortensis	2	Ah005918, Ah011745
Amaranthaceae	Beta vulgaris	1	BVRB_9g210060
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg12018, Sbi_jg17026, Sbi_jg46946, Sbi_jg61575
Amaranthaceae	Salicornia europaea	2	Seu_jg21235, Seu_jg304
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00008351, GOSA_00009571
Amaranthaceae	Suaeda glauca	4	Sgl24611, Sgl29759, Sgl80424, Sgl82885
Amaranthaceae	Chenopodium album	4	gene:ENSEOMG00000019524, gene:ENSEOMG00000029182 ... gene:ENSEOMG00000038849, gene:ENSEOMG00000042278
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.4AG0009320, CQ.Regalona.r1.4BG0009440 ... CQ.Regalona.r1.9AG0009600, CQ.Regalona.r1.9BG0012770
Anacardiaceae	Pistacia vera	2	pistato.v30086940, pistato.v30089210
Apiaceae	Apium graveolens	2	Ag3G00527, Ag7G01627
Arecaceae	Cocos nucifera	3	COCNU_02G002380, COCNU_16G001510, scaffold028023G000010
Arecaceae	Phoenix dactylifera	2	gene-LOC103706865, gene-LOC120112863
Asparagaceae	Asparagus officinalis	2	AsparagusV1_05.1870.V1.1, AsparagusV1_07.872.V1.1
Asteraceae	Flaveria trinervia	3	Ftri17G26167, Ftri5G05457, Ftri6G25655
Brassicaceae	Arabidopsis thaliana	2	AT1G54820.1, AT3G58690.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10006022m.g.v1.0, Thhalv10024152m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp5g04160.v2.2, SpUn0002_0570.v2.2
Brassicaceae	Brassica nigra	2	BniB06g054740.2N, BniB08g073230.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq02G2873
Casuarinaceae	Casuarina glauca	3	Cgl02G2989, Cgl06G1291, Cgl06G1299
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno04g04690, gene.Cymno09g01890
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate04g06010, gene.Thate06g18680
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-7807
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.2392, evm.TU.LG04.1694
Plantaginaceae	Plantago ovata	1	Pov_00037024
Plumbaginaceae	Limonium bicolor	4	Lb1G06696, Lb1G06713, Lb3G19516, Lb5G27953
Poaceae	Echinochloa crus-galli	6	AH05.2551, AH05.644, BH05.2647, BH05.697, CH05.799 ... CH06.1519
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_5AG0374110, gene-QOZ80_5AG0401740 ... gene-QOZ80_5BG0422190, gene-QOZ80_5BG0450290
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.1HG0030630.1, HORVU.MOREX.r3.1HG0063750.1
Poaceae	Lolium multiflorum	2	gene-QYE76_010447, gene-QYE76_013384
Poaceae	Oryza coarctata	3	Oco09G009440, Oco10G004350, Oco10G009190
Poaceae	Oryza sativa	2	LOC_Os05g11750.2, LOC_Os05g33080.1
Poaceae	Paspalum vaginatum	2	gene-BS78_09G082600, gene-BS78_09G136100
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0501506, Pt_Chr0505164, Pt_Chr0505420
Poaceae	Sporobolus alterniflorus	6	Chr01G021020, Chr12G016950, Chr12G025700, Chr18G004240 ... Chr22G009020, Chr22G013020
Poaceae	Thinopyrum elongatum	2	Tel1E01G228100, Tel1E01G414300
Poaceae	Triticum dicoccoides	4	gene_TRIDC1AG017880, gene_TRIDC1AG037470 ... gene_TRIDC1BG021920, gene_TRIDC1BG042540
Poaceae	Triticum aestivum	6	TraesCS1A02G124700.1, TraesCS1A02G249500.1 ... TraesCS1B02G143700.1, TraesCS1B02G260300.1, TraesCS1D02G129100.1, TraesCS1D02G249000.1
Poaceae	Zea mays	3	Zm00001eb283880_P001, Zm00001eb287540_P001 ... Zm00001eb347400_P001
Poaceae	Zoysia japonica	3	nbis-gene-14505, nbis-gene-23775, nbis-gene-23777
Poaceae	Zoysia macrostachya	3	Zma_g26819, Zma_g27847, Zma_g28199
Portulacaceae	Portulaca oleracea	4	evm.TU.LG06.1026, evm.TU.LG08.616, evm.TU.LG11.238 ... evm.TU.LG22.1400
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g11730, gene.Posoc08g02740
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_2_RagTag.2033, evm.TU.Scaffold_9_RagTag.1176
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-20998
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-17569, nbisL1-mrna-8637
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-13706, nbisL1-mrna-18678
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000003l.730, evm.TU.utg000009l.76
Rhizophoraceae	Kandelia obovata	2	Maker00004997, Maker00009340
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-12961, nbisL1-mrna-1328
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-16183, nbisL1-mrna-4893
Salicaceae	Populus euphratica	2	populus_peu13439, populus_peu15780
Solanaceae	Lycium barbarum	2	gene-LOC132618840, gene-LOC132645160
Solanaceae	Solanum chilense	2	SOLCI000020500, SOLCI002633400
Solanaceae	Solanum pennellii	2	gene-LOC107008610, gene-LOC107024452
Tamaricaceae	Reaumuria soongarica	3	STRG.8256_chr05_-, gene_13006, gene_17955
Tamaricaceae	Tamarix chinensis	4	TC01G1958, TC05G2339, TC06G0770, TC11G0315
Zosteraceae	Zostera marina	1	Zosma01g32370.v3.1