Basic Information
Locus ID:
nbisL1-mrna-13693
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12474536 | 12478471 | - | nbisL1-mrna-13693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.23 | 59,492.56 Da | 44.45 | 103.28 | 0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 27 | 441 | 2.8E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 143 | 194 | 7.6E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 21 | 445 | 1.9E-75 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 96 | 110 | 5.6E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 111 | 119 | 5.6E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 151 | 161 | 5.6E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 82 | 93 | 5.6E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_034889726.1 | sodium/hydrogen exchanger 2-like [Populus alba] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2L0W017 | Sodium/hydrogen exchanger OS=Populus nigra OX=3691 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology