Basic Information
Locus ID:
nbisL1-mrna-13657
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12214774 | 12218709 | + | nbisL1-mrna-13657 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 99,097.96 Da | 37.52 | 97.07 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 572 | 845 | 1.08079E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 58 | 1.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 364 | 423 | 1.2E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 569 | 840 | 3.3E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 321 | 359 | 0.0071 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 87 | 143 | 1.1E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 547 | 842 | 3.1E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 431 | 8.5E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 320 | 4.5E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 445 | 5.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 530 | 643 | 2.2E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 644 | 860 | 1.4E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 182 | 206 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 386 | 409 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 108 | 131 | 0.0016 | IPR003591 |
| SMART | SM00220 | serkin_6 | 566 | 846 | 1.8E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 85 | 107 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 410 | 434 | 48.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 566 | 846 | 41.332775 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 572 | 594 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 691 | 703 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 877 | 914 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034920413.1 | receptor-like kinase TMK4 [Populus alba] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8CF03 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_045114 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology