Basic Information
Locus ID:
nbisL1-mrna-13625
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 11300441 | 11303722 | + | nbisL1-mrna-13625 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 48,554.64 Da | 48.70 | 64.37 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 227 | 311 | 1.1E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 432 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_034916469.1 | protein WVD2-like 5 [Populus alba] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KMZ0 | TPX2 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology