Basic Information
Locus ID:
nbisL1-mrna-13613
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000224F_pilon | 4757255 | 4759221 | - | nbisL1-mrna-13613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 60,747.54 Da | 35.72 | 100.20 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 128 | 188 | 7.2E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 354 | 546 | 2.5E-28 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 5.7E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 223 | 8.32E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 546 | 1.27E-45 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 240 | 1.7E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 197 | 4.6E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 337 | 553 | 1.1E-45 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 554 | 27.184641 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034899585.1 | pollen receptor-like kinase 4 [Populus alba] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5K5T6 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_020369 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology