Basic Information
Locus ID:
nbisL1-mrna-1360
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 10948085 | 10950758 | - | nbisL1-mrna-1360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 58,294.43 Da | 38.47 | 87.79 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 188 | 454 | 8.09003E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 185 | 451 | 1.7E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 166 | 453 | 3.37E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 162 | 257 | 2.3E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 258 | 471 | 1.4E-64 | - |
| SMART | SM00220 | serkin_6 | 182 | 459 | 5.0E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 182 | 460 | 38.548378 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 188 | 211 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 304 | 316 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 505 | - | - |
| Coils | Coil | Coil | 202 | 222 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_007048877.2 | PREDICTED: probable receptor-like protein kinase At2g42960 [Theobroma cacao] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2MM48 | ATP binding protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology