Basic Information
Locus ID:
nbisL1-mrna-1360
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000017F_pilon | 2505799 | 2516823 | - | nbisL1-mrna-1360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 187,822.23 Da | 44.36 | 83.63 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 145 | 417 | 9.9022E-134 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1299 | 1562 | 6.44362E-150 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1338 | 1504 | 1.1E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 165 | 411 | 2.7E-30 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 211 | 383 | 6.28E-41 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1295 | 1562 | 1.18E-78 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 1421 | 1563 | 1.1E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1236 | 1419 | 9.9E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 210 | 383 | 4.3E-52 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1272 | 1563 | 2.1E-124 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1235 | 1562 | 57.953751 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1018 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1040 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1019 | 1034 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 475 | - | - |
| Coils | Coil | Coil | 881 | 901 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021596571.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A isoform X1 [Manihot esculenta] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M4X8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology