Basic Information
Locus ID:
nbisL1-mrna-13536
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 11121471 | 11127048 | - | nbisL1-mrna-13536 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 85,718.45 Da | 52.04 | 70.04 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 500 | 746 | 1.72952E-131 | - |
| CDD | cd00130 | PAS | 132 | 233 | 3.41137E-13 | IPR000014 |
| Pfam | PF00989 | PAS fold | 124 | 231 | 1.1E-11 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 494 | 746 | 7.8E-70 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 127 | 230 | 1.24E-18 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 471 | 745 | 4.05E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 487 | 571 | 4.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 572 | 770 | 9.7E-66 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 133 | 239 | 3.3E-23 | - |
| SMART | SM00220 | serkin_6 | 494 | 753 | 6.3E-60 | IPR000719 |
| SMART | SM00091 | pas_2 | 123 | 189 | 5.9E-8 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 123 | 233 | 3.5E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 494 | 754 | 44.145443 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 121 | 192 | 16.541555 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 613 | 625 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 717 | 739 | 2.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 568 | 581 | 2.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 673 | 695 | 2.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 607 | 625 | 2.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 654 | 664 | 2.9E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 375 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_002519231.1 | serine/threonine-protein kinase PITSLRE isoform X1 [Ricinus communis] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L7M7 | Serine/threonine-protein kinase CTR1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology