Basic Information
Locus ID:
nbisL1-mrna-13461
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000224F_pilon | 3805314 | 3809994 | - | nbisL1-mrna-13461 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 47,179.70 Da | 36.84 | 113.16 | 0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 279 | 418 | 1.3E-20 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 90 | 244 | 1.0E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 117 | 260 | 1.6E-14 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 269 | 422 | 7.9E-18 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 71 | 421 | 1.5E-92 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 62 | 421 | 4.9E-108 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_048228859.1 | vacuolar cation/proton exchanger 3 [Ricinus communis] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2LPJ6 | Vacuolar cation/proton exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology