Basic Information
Locus ID:
nbisL1-mrna-13451
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 10127616 | 10130557 | + | nbisL1-mrna-13451 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 70,794.46 Da | 40.87 | 94.09 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 352 | 615 | 5.01651E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 68 | 3.4E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 349 | 608 | 4.2E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 8.3E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 212 | 7.18E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 609 | 5.66E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 314 | 420 | 2.2E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 139 | 1.4E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 421 | 637 | 6.3E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 260 | 1.0E-18 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 630 | 32.696903 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.388525 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 352 | 374 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 652 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 615 | 652 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_002305880.1 | probable inactive receptor kinase At1g48480 [Populus trichocarpa] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9H3B3 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G086100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology