Basic Information
Locus ID:
nbisL1-mrna-13439
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 9181274 | 9191197 | + | nbisL1-mrna-13439 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 79,949.63 Da | 43.87 | 97.74 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 457 | 705 | 5.03603E-126 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 451 | 705 | 2.0E-68 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 69 | 266 | 2.2E-70 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 425 | 705 | 2.02E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 444 | 529 | 1.9E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 530 | 714 | 1.2E-58 | - |
| SMART | SM00220 | serkin_6 | 451 | 710 | 4.8E-64 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 451 | 709 | 46.138336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 572 | 584 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 457 | 478 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 566 | 584 | 6.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 676 | 698 | 6.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 632 | 654 | 6.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 525 | 538 | 6.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 613 | 623 | 6.9E-11 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_012089932.1 | serine/threonine-protein kinase CTR1 [Jatropha curcas] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067LKZ6 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_01524 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology