Basic Information
Locus ID:
nbisL1-mrna-13342
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
PTI1-like tyrosine-protein kinase At3g15890
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 8312746 | 8315020 | - | nbisL1-mrna-13342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 42,873.71 Da | 35.49 | 87.90 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 49 | 316 | 3.06616E-111 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 47 | 314 | 9.8E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 314 | 1.48E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 331 | 8.4E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 15 | 118 | 8.4E-31 | - |
| SMART | SM00220 | serkin_6 | 43 | 314 | 6.3E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 43 | 323 | 37.134979 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 49 | 72 | - | IPR017441 |
| Coils | Coil | Coil | 63 | 83 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006381846.2 | - | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | B9N8S8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G173800 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology