Basic Information
Locus ID:
nbisL1-mrna-13255
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000224F_pilon | 2605078 | 2612345 | + | nbisL1-mrna-13255 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 170,052.39 Da | 38.40 | 80.00 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 257 | 520 | 7.72177E-96 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1285 | 1514 | 3.81338E-121 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 274 | 514 | 5.6E-25 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1383 | 1458 | 1.4E-12 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 320 | 487 | 2.62E-29 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1283 | 1514 | 2.55E-70 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 1455 | 1513 | 2.7E-13 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1263 | 1395 | 4.5E-32 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 318 | 487 | 7.8E-38 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1257 | 1515 | 1.9E-75 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1211 | 1514 | 40.050171 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 981 | 1003 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_024446686.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Populus trichocarpa] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2ME17 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology