Basic Information
Locus ID:
nbisL1-mrna-13223
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 4674756 | 4675648 | - | nbisL1-mrna-13223 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 11,483.24 Da | 72.47 | 88.80 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1 | 98 | 1.12E-8 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 1 | 100 | 3.7E-7 | IPR036961 |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10180.2 | - | 0 |
| RefSeq | XP_011027265.1 | PREDICTED: centromere-associated protein E [Populus euphratica] | 0 |
| F4J2K4 | Kinesin-like protein KIN-7O OS=Arabidopsis thaliana OX=3702 GN=KIN7O PE=3 SV=1 | 0 | |
| TrEMBL | B9SZX8 | Kinesin heavy chain, putative OS=Ricinus communis OX=3988 GN=RCOM_0072440 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah016730, Ah024460, Ah032669 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g21410.v2.2 |
| Poaceae | Zea mays | 1 | Zm00001eb195540_P001 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13223 |