Basic Information
Locus ID:
nbisL1-mrna-13222
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001779F_pilon | 2605637 | 2610061 | - | nbisL1-mrna-13222 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 104,199.46 Da | 35.80 | 93.28 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 608 | 881 | 1.00989E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 122 | 175 | 1.6E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 339 | 374 | 8.3E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 603 | 876 | 5.1E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 71 | 1.5E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 578 | 887 | 6.88E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 443 | 1.81E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 562 | 679 | 3.5E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 335 | 4.3E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 336 | 461 | 1.0E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 680 | 898 | 2.1E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 195 | 218 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 143 | 1.4E-5 | IPR003591 |
| SMART | SM00220 | serkin_6 | 602 | 882 | 3.0E-45 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 292 | 323 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 399 | 423 | 51.0 | IPR003591 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 7.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 122 | 143 | 7.527138 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 602 | 882 | 39.368149 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 608 | 630 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 727 | 739 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 488 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021642853.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KI38 | Putative receptor protein kinase TMK1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology