Basic Information
Locus ID:
nbisL1-mrna-13182
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000224F_pilon | 2124615 | 2129192 | - | nbisL1-mrna-13182 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 79,120.92 Da | 43.79 | 88.97 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 17 | 265 | 1.96257E-70 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 373 | 524 | 3.1E-28 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 31 | 267 | 1.2E-50 | IPR001220 |
| Pfam | PF05278 | Arabidopsis phospholipase-like protein (PEARLI 4) | 587 | 716 | 3.6E-19 | IPR007942 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 27 | 265 | 1.91E-50 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 528 | 3.1E-49 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 449 | 8.9E-26 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 17 | 271 | 1.1E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 550 | 4.2E-25 | - |
| SMART | SM00220 | serkin_6 | 372 | 637 | 1.5E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 715 | 26.237663 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 150 | 156 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 496 | 508 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 378 | 400 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021652120.1 | L-type lectin-domain containing receptor kinase S.6 [Hevea brasiliensis] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A836J3L0 | Serine/threonine kinase family protein OS=Salix suchowensis OX=1278906 GN=IMY05_005G0145300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology