Basic Information
Locus ID:
nbisL1-mrna-13135
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001779F_pilon | 1947106 | 1959182 | + | nbisL1-mrna-13135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 229,580.11 Da | 51.00 | 83.54 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 192 | 268 | 7.9E-9 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 274 | 483 | 3.1E-76 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 186 | 514 | 5.84E-101 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 181 | 270 | 8.0E-18 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 271 | 495 | 7.8E-93 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 184 | 491 | 4.4E-127 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 268 | 483 | 80.242401 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 186 | 267 | 11.433674 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 379 | 390 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 347 | 364 | 7.6E-30 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 380 | 398 | 7.6E-30 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 258 | 279 | 7.6E-30 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 433 | 454 | 7.6E-30 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1993 | 2018 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 77 | - | - |
| Coils | Coil | Coil | 1572 | 1627 | - | - |
| Coils | Coil | Coil | 1509 | 1529 | - | - |
| Coils | Coil | Coil | 699 | 719 | - | - |
| Coils | Coil | Coil | 490 | 517 | - | - |
| Coils | Coil | Coil | 1866 | 1903 | - | - |
| Coils | Coil | Coil | 1783 | 1810 | - | - |
| Coils | Coil | Coil | 570 | 618 | - | - |
| Coils | Coil | Coil | 1925 | 1959 | - | - |
| Coils | Coil | Coil | 784 | 804 | - | - |
| Coils | Coil | Coil | 855 | 882 | - | - |
| Coils | Coil | Coil | 1636 | 1656 | - | - |
| Coils | Coil | Coil | 1537 | 1564 | - | - |
| Coils | Coil | Coil | 1692 | 1733 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.3 | - | 0 |
| RefSeq | XP_021642902.1 | kinesin-like protein KIN-12C isoform X1 [Hevea brasiliensis] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1YUF3 | Kinesin motor domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G153000 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology