Basic Information
Locus ID:
nbisL1-mrna-1307
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 11367633 | 11370970 | - | nbisL1-mrna-1307 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 109,639.42 Da | 33.24 | 99.49 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 3.7E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 512 | 570 | 7.8E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 695 | 912 | 2.2E-45 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 321 | 618 | 2.27E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 384 | 1.94E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 969 | 7.28E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 291 | 2.7E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 676 | 776 | 6.0E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 189 | 3.0E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 777 | 989 | 4.3E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 627 | 1.7E-84 | IPR032675 |
| SMART | SM00220 | serkin_6 | 694 | 958 | 5.1E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 694 | 991 | 38.732121 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 700 | 723 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 970 | 999 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021658128.1 | receptor-like protein kinase HSL1 [Hevea brasiliensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9MYC8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G016600 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology