Basic Information
Locus ID:
nbisL1-mrna-13055
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000224F_pilon | 1155788 | 1159736 | - | nbisL1-mrna-13055 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 106,587.60 Da | 32.66 | 103.85 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 61 | 1.0E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 163 | 181 | 0.76 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 260 | 319 | 7.8E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 691 | 893 | 2.0E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 454 | 512 | 1.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 324 | 4.55E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 682 | 908 | 2.02E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 240 | 590 | 4.32E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 655 | 766 | 1.1E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 321 | 3.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 134 | 2.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 622 | 1.5E-82 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 933 | 5.9E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 222 | 6.9E-24 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 931 | 3.1E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 475 | 499 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 305 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 330 | 354 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 426 | 450 | 240.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 981 | 35.97599 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 17 | 5.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_022772630.1 | receptor protein kinase CLAVATA1-like [Durio zibethinus] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2P2JCU4 | Non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology