Basic Information
Locus ID:
nbisL1-mrna-13023
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001779F_pilon | 1243491 | 1246597 | + | nbisL1-mrna-13023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 67,451.45 Da | 37.89 | 91.89 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 270 | 536 | 3.3E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 180 | 2.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 7.0E-13 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 247 | 539 | 2.7E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 192 | 4.22E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 346 | 558 | 6.1E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 203 | 3.5E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 238 | 345 | 1.6E-38 | - |
| SMART | SM00220 | serkin_6 | 269 | 538 | 2.0E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 269 | 524 | 35.24102 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 388 | 400 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 275 | 297 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_012088120.1 | protein NSP-INTERACTING KINASE 1 [Jatropha curcas] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KHL6 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology