Basic Information
Locus ID:
nbisL1-mrna-12999
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7523384 | 7529442 | - | nbisL1-mrna-12999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 112,602.50 Da | 50.28 | 80.15 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01366 | KISc_C_terminal | 397 | 721 | 3.14432E-170 | - |
| Pfam | PF00225 | Kinesin motor domain | 405 | 718 | 1.3E-103 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 44 | 163 | 1.1E-14 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 42 | 177 | 7.27E-24 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 399 | 754 | 1.1E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 394 | 762 | 7.3E-132 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 34 | 163 | 1.4E-27 | IPR036872 |
| SMART | SM00033 | ch_5 | 43 | 161 | 1.8E-10 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 397 | 727 | 2.0E-163 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 399 | 719 | 120.875725 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 41 | 163 | 19.526695 | IPR001715 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 619 | 630 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 620 | 638 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 669 | 690 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 473 | 494 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 589 | 606 | 1.8E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 927 | 1019 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 768 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 745 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 988 | 1003 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 955 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 895 | 915 | - | - |
| Coils | Coil | Coil | 379 | 399 | - | - |
| Coils | Coil | Coil | 726 | 753 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27000.1 | kinesin 4. Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. | 0 |
| RefSeq | XP_024438915.1 | kinesin-like protein KIN-14G [Populus trichocarpa] | 0 |
| O81635 | Kinesin-like protein KIN-14G OS=Arabidopsis thaliana OX=3702 GN=KIN14G PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T2XFJ0 | Kinesin-like protein OS=Populus deltoides OX=3696 GN=H0E87_023078 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology