Basic Information
Locus ID:
nbisL1-mrna-12960
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000149F_pilon | 4824537 | 4831004 | - | nbisL1-mrna-12960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.41 | 8,758.11 Da | 53.54 | 99.87 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 62 | 6.54E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 24 | 60 | 1.3E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021830498.1 | putative F-box protein At3g25750 [Prunus avium] | 0 |
| TrEMBL | A0A6P5TS37 | putative F-box protein At3g25750 OS=Prunus avium OX=42229 GN=LOC110770628 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_04.137.V1.1, AsparagusV1_04.138.V1.1 ... |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12960 |