Basic Information
Locus ID:
nbisL1-mrna-12955
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7217794 | 7222268 | - | nbisL1-mrna-12955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 60,947.39 Da | 36.00 | 106.19 | 0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 37 | 451 | 2.1E-61 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 152 | 205 | 4.7E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 34 | 463 | 1.3E-77 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 106 | 120 | 1.1E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 161 | 171 | 1.1E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 92 | 103 | 1.1E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 121 | 129 | 1.1E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_042988367.1 | sodium/hydrogen exchanger 1-like [Carya illinoinensis] | 0 |
| Q68KI4 | Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=NHX1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T1PWE7 | Sodium/hydrogen exchanger OS=Carya illinoinensis OX=32201 GN=CIPAW_07G014400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology