Basic Information
Locus ID:
nbisL1-mrna-12946
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7109268 | 7120300 | - | nbisL1-mrna-12946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 177,517.77 Da | 46.78 | 97.51 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 170 | 265 | 4.37515E-4 | - |
| Pfam | PF00931 | NB-ARC domain | 169 | 405 | 1.6E-37 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 478 | 1006 | 4.42E-32 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1134 | 1435 | 5.65E-13 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 151 | 415 | 1.41E-44 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 152 | 321 | 1.2E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 521 | 1025 | 7.9E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1272 | 1543 | 4.5E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1033 | 1209 | 5.0E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 326 | 408 | 1.5E-16 | IPR042197 |
| SMART | SM00382 | AAA_5 | 176 | 326 | 9.4E-5 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 358 | 372 | 2.3E-21 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 252 | 266 | 2.3E-21 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 2.3E-21 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 625 | 641 | 2.3E-21 | - |
| Coils | Coil | Coil | 35 | 62 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_021651259.1 | disease resistance protein At4g27190-like isoform X2 [Hevea brasiliensis] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MMH8 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology