Basic Information
Locus ID:
nbisL1-mrna-12826
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000149F_pilon | 4178398 | 4180851 | + | nbisL1-mrna-12826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 89,497.54 Da | 32.48 | 98.00 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 79 | 4.4E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 719 | 806 | 1.4E-13 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 277 | 335 | 1.1E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 252 | 274 | 0.099 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 372 | 392 | 0.61 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 84 | 143 | 2.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 719 | 809 | 1.83E-22 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 315 | 624 | 3.15E-54 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 87 | 422 | 7.85E-65 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 707 | 815 | 3.3E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 291 | 2.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 390 | 3.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 185 | 6.9E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 391 | 632 | 5.9E-61 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 442 | 466 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 322 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 467 | 490 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 154 | 7.8 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 716 | 817 | 14.336837 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 722 | 745 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_017973822.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Theobroma cacao] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Q3D9U1 | Pkinase domain-containing protein/LRR_1 domain-containing protein/LRR_4 domain-containing protein/LRR_7 domain-containing protein/LRR_6 domain-containing protein/LRR_8 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32449 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology