Basic Information
Locus ID:
nbisL1-mrna-12772
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 2319555 | 2336062 | + | nbisL1-mrna-12772 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 106,652.03 Da | 35.57 | 93.94 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 653 | 894 | 1.70081E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 648 | 893 | 1.7E-46 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 393 | 568 | 9.7E-44 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 296 | 354 | 1.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 107 | 359 | 2.64E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 634 | 915 | 3.14E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 208 | 2.3E-25 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 392 | 564 | 9.5E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 379 | 4.5E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 609 | 722 | 2.9E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 723 | 907 | 5.0E-52 | - |
| SMART | SM00220 | serkin_6 | 647 | 921 | 4.6E-32 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 319 | 341 | 7.419328 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 647 | 909 | 36.68269 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 767 | 779 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021615709.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Manihot esculenta] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A140G4X5 | LRR-RLK OS=Vernicia montana OX=316732 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology