Basic Information
Locus ID:
nbisL1-mrna-12676
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 988974 | 992093 | + | nbisL1-mrna-12676 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.15 | 73,113.21 Da | 36.73 | 101.84 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 296 | 337 | 0.00397842 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 412 | 675 | 5.1E-32 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 4.0E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 72 | 130 | 9.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 1.5E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 238 | 6.8E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 675 | 3.75E-48 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 254 | 1.4E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 680 | 4.0E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 486 | 1.9E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 140 | 6.1E-30 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 678 | 24.513315 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 286 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012083586.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Jatropha curcas] | 0 |
| Q9C660 | Proline-rich receptor-like protein kinase PERK10 OS=Arabidopsis thaliana OX=3702 GN=PERK10 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067K171 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_14534 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology