Basic Information
Locus ID:
nbisL1-mrna-1267
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 13433903 | 13455366 | - | nbisL1-mrna-1267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 244,462.16 Da | 52.42 | 83.08 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01373 | KISc_KLP2_like | 188 | 535 | 1.09365E-180 | - |
| Pfam | PF00225 | Kinesin motor domain | 221 | 526 | 3.6E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 189 | 556 | 1.51E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 182 | 556 | 2.1E-135 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 187 | 534 | 2.4E-163 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 189 | 526 | 119.580811 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 422 | 433 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 476 | 497 | 8.6E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 390 | 407 | 8.6E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 261 | 282 | 8.6E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 423 | 441 | 8.6E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1931 | 1952 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 533 | 560 | - | - |
| Coils | Coil | Coil | 1910 | 1930 | - | - |
| Coils | Coil | Coil | 1780 | 1842 | - | - |
| Coils | Coil | Coil | 1871 | 1898 | - | - |
| Coils | Coil | Coil | 1018 | 1045 | - | - |
| Coils | Coil | Coil | 1366 | 1386 | - | - |
| Coils | Coil | Coil | 915 | 935 | - | - |
| Coils | Coil | Coil | 2034 | 2099 | - | - |
| Coils | Coil | Coil | 747 | 781 | - | - |
| Coils | Coil | Coil | 862 | 882 | - | - |
| Coils | Coil | Coil | 1969 | 1989 | - | - |
| Coils | Coil | Coil | 1724 | 1758 | - | - |
| Coils | Coil | Coil | 614 | 641 | - | - |
| Coils | Coil | Coil | 1660 | 1708 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.3 | - | 0 |
| RefSeq | XP_021642902.1 | kinesin-like protein KIN-12C isoform X1 [Hevea brasiliensis] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2XSD8 | Kinesin motor domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_019314 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology