Basic Information
Locus ID:
nbisL1-mrna-1266
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 11659627 | 11666772 | + | nbisL1-mrna-1266 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 85,054.71 Da | 41.55 | 89.54 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 492 | 763 | 3.3E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 78 | 9.4E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 468 | 763 | 1.62E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 245 | 1.25E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 455 | 566 | 8.5E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 567 | 780 | 9.0E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 261 | 5.2E-43 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 767 | 33.559078 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_043805600.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Manihot esculenta] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K7E2 | Protein STRUBBELIG-RECEPTOR FAMILY 3-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology