Basic Information
Locus ID:
nbisL1-mrna-12653
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000149F_pilon | 3288346 | 3291291 | - | nbisL1-mrna-12653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 41,988.11 Da | 57.39 | 85.78 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 141 | 184 | 2.34777E-6 | - |
| Pfam | PF00651 | BTB/POZ domain | 37 | 136 | 2.8E-11 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 223 | 309 | 1.4E-12 | IPR000197 |
| SUPERFAMILY | SSF57933 | TAZ domain | 215 | 317 | 1.57E-21 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 39 | 134 | 1.65E-10 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 29 | 136 | 9.0E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 139 | 210 | 1.6E-11 | - |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 211 | 329 | 3.7E-19 | IPR035898 |
| SMART | SM00551 | TAZ_2 | 216 | 310 | 3.3E-20 | IPR000197 |
| SMART | SM00225 | BTB_4 | 38 | 140 | 3.2E-11 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 38 | 107 | 10.943824 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 0 |
| RefSeq | XP_021691022.1 | BTB/POZ and TAZ domain-containing protein 1-like [Hevea brasiliensis] | 0 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JXY9 | Protein binding protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology