Basic Information
Locus ID:
nbisL1-mrna-12640
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
NDR1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 690290 | 693821 | + | nbisL1-mrna-12640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 23,065.26 Da | 43.41 | 82.61 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20610.1 | non-race specific disease resistance protein, putative. | 0 |
| RefSeq | XP_021608369.1 | protein NDR1 [Manihot esculenta] | 0 |
| TrEMBL | A0A2P2MZ88 | Uncharacterized protein MANES_03G123200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg24528, jg37782 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_17864, gene_5147 |
| Amaranthaceae | Atriplex hortensis | 13 | Ah008527, Ah008528, Ah008529, Ah008530, Ah008532, Ah008533 ... |
| Amaranthaceae | Salicornia bigelovii | 5 | Sbi_jg18845, Sbi_jg18857, Sbi_jg18858, Sbi_jg37282 ... |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg5100, Seu_jg5102, Seu_jg5103, Seu_jg5105 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00007006, GOSA_00007041 |
| Amaranthaceae | Suaeda glauca | 13 | Sgl22807, Sgl22808, Sgl22936, Sgl23719, Sgl23723, Sgl23724 ... |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000011102, gene:ENSEOMG00000030016 ... |
| Amaranthaceae | Chenopodium quinoa | 10 | CQ.Regalona.r1.4AG0021420, CQ.Regalona.r1.4AG0021440 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30088130, pistato.v30157740 |
| Apiaceae | Apium graveolens | 3 | Ag6G00683, Ag9G00940, Ag9G00941 |
| Arecaceae | Cocos nucifera | 1 | scaffold010088G000060 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103717679 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G23939, Ftri2G16588 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT3G20590.1, AT3G20600.1, AT3G20610.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10021500m.g.v1.0, Thhalv10022399m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 4 | Sp3g18610.v2.2, Sp3g18630.v2.2, Sp3g18640.v2.2 ... |
| Brassicaceae | Brassica nigra | 4 | BniB01g043180.2N, BniB01g043190.2N, BniB07g031440.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq01G1241, Ceq01G1242, Ceq01G1244 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G1379, Cgl01G1380 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g18910 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9125 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG05.1793, evm.TU.LG05.1794 |
| Plantaginaceae | Plantago ovata | 8 | Pov_00005874, Pov_00020952, Pov_00020953, Pov_00020954 ... |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G03322 |
| Portulacaceae | Portulaca oleracea | 8 | evm.TU.LG01.2009, evm.TU.LG01.2010, evm.TU.LG13.462 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.304 |
| Rhizophoraceae | Carallia pectinifolia | 5 | nbisL1-mrna-11039, nbisL1-mrna-11049, nbisL1-mrna-11054 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5310 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7193 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000003l.122 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009423 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-19471, nbisL1-mrna-22099 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12640, nbisL1-mrna-23577 |
| Salicaceae | Populus euphratica | 2 | populus_peu00371, populus_peu17412 |
| Solanaceae | Lycium barbarum | 5 | gene-LOC132629266, gene-LOC132629269, gene-LOC132629270 ... |
| Solanaceae | Solanum chilense | 3 | SOLCI003691400, SOLCI003875600, SOLCI006667900 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107007710, gene-LOC107013635, gene-LOC107013646 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.24820_chr08_- |
| Tamaricaceae | Tamarix chinensis | 2 | TC05G2877, TC05G2888 |