Basic Information
Locus ID:
nbisL1-mrna-12602
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 378938 | 379888 | + | nbisL1-mrna-12602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 20,110.64 Da | 46.87 | 96.40 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 135 | 178 | 3.0E-14 | IPR021820 |
| Pfam | PF00069 | Protein kinase domain | 6 | 75 | 2.5E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 153 | 1.31E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 86 | 4.8E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 178 | 15.128341 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 37 | 49 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 178 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27290.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_048234993.1 | - | 0 |
| O81832 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 | 0 | |
| TrEMBL | A0A2P2MSF5 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2136 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah003627, Ah017478, Ah017734, Ah031514 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00011440, GOSA_00012107 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000033066 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30065570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1043300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG082020, gene_TRIDC3BG079770 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-11728, nbis-gene-20192, nbis-gene-22941 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-26558, nbisL1-mrna-29828 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12602, nbisL1-mrna-24800 |
| Salicaceae | Populus euphratica | 1 | populus_peu27963 |