Basic Information
Locus ID:
nbisL1-mrna-12576
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
serine threonine-protein kinase HT1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000149F_pilon | 2794645 | 2796593 | + | nbisL1-mrna-12576 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 32,481.47 Da | 39.34 | 90.39 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 64 | 272 | 8.72362E-100 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 59 | 271 | 2.4E-54 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 49 | 274 | 5.53E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 47 | 139 | 2.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 280 | 4.3E-46 | - |
| SMART | SM00220 | serkin_6 | 57 | 283 | 3.6E-45 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 23 | 279 | 3.9E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 286 | 38.336369 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 238 | 260 | 1.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 173 | 191 | 1.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 219 | 229 | 1.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 135 | 148 | 1.5E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020537420.1 | serine/threonine/tyrosine-protein kinase HT1 isoform X3 [Jatropha curcas] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7ALE5 | Putative Serine/threonine-protein kinase HT1 OS=Davidia involucrata OX=16924 GN=Din_025334 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology