Basic Information
Locus ID:
nbisL1-mrna-12569
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000000F_pilon | 166955 | 168721 | - | nbisL1-mrna-12569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.26 | 24,835.91 Da | 62.00 | 66.96 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 190 | 226 | 2.76387E-18 | - |
| Pfam | PF01849 | NAC domain | 79 | 134 | 1.5E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 188 | 226 | 2.8E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 85 | 138 | 7.0E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 188 | 225 | 2.8E-19 | - |
| SMART | SM01407 | NAC_2 | 79 | 135 | 3.3E-24 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 76 | 141 | 17.478951 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 88 | - | - |
| Coils | Coil | Coil | 39 | 59 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_012080590.1 | nascent polypeptide-associated complex subunit alpha-like protein 2 [Jatropha curcas] | 0 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2MEA3 | Uncharacterized protein MANES_01G043900 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology