Basic Information
Locus ID:
nbisL1-mrna-1256
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10415254 | 10422454 | + | nbisL1-mrna-1256 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 58,194.42 Da | 37.96 | 86.31 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 191 | 457 | 2.44215E-106 | - |
| Pfam | PF00069 | Protein kinase domain | 188 | 454 | 1.5E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 166 | 457 | 1.08E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 163 | 260 | 8.0E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 261 | 470 | 6.9E-63 | - |
| SMART | SM00220 | serkin_6 | 185 | 463 | 2.3E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 185 | 464 | 37.940617 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 307 | 319 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 191 | 213 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 518 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039056028.1 | probable serine/threonine-protein kinase At1g01540 [Hibiscus syriacus] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6P4LXU8 | probable serine/threonine-protein kinase At1g01540 OS=Gossypium arboreum OX=29729 GN=LOC108453587 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology