Basic Information
Locus ID:
nbisL1-mrna-12511
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CPK30
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000149F_pilon | 2404272 | 2416833 | - | nbisL1-mrna-12511 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 61,431.66 Da | 38.80 | 88.94 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 104 | 358 | 2.64331E-130 | - |
| Pfam | PF13499 | EF-hand domain pair | 369 | 430 | 5.2E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 441 | 503 | 7.1E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 107 | 360 | 5.3E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 355 | 529 | 2.86E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 101 | 360 | 1.48E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 374 | 431 | 6.0E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 106 | 191 | 1.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 373 | 9.1E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 432 | 545 | 1.1E-22 | - |
| SMART | SM00054 | efh_1 | 441 | 469 | 4.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 477 | 505 | 4.3E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 105 | 365 | 5.0E-93 | IPR000719 |
| SMART | SM00054 | efh_1 | 370 | 398 | 3.4E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 406 | 434 | 0.0032 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 437 | 472 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 366 | 401 | 16.326607 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 473 | 508 | 14.234451 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 105 | 365 | 47.495201 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 450 | 462 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 486 | 498 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 379 | 391 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 111 | 134 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 225 | 237 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 79 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021679214.1 | calcium-dependent protein kinase 10-like [Hevea brasiliensis] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067K856 | Calcium-dependent protein kinase 30 OS=Jatropha curcas OX=180498 GN=JCGZ_11569 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology