Basic Information
Locus ID:
nbisL1-mrna-12435
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
galactinol--sucrose galactosyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2527988 | 2533184 | - | nbisL1-mrna-12435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 84,992.70 Da | 27.55 | 83.32 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 4 | 755 | 0.0 | IPR008811 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 193 | 519 | 8.43E-58 | IPR017853 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 197 | 519 | 1.7E-11 | IPR013785 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 687 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 707 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57520.1 | seed imbibition 2. | 0 |
| RefSeq | XP_006381015.2 | probable galactinol--sucrose galactosyltransferase 2 [Populus trichocarpa] | 0 |
| Q94A08 | Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K1ZX59 | galactinol--sucrose galactosyltransferase OS=Populus trichocarpa OX=3694 GN=POPTR_006G052800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology