Basic Information
Locus ID:
nbisL1-mrna-12379
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001602F_pilon | 1677242 | 1679499 | - | nbisL1-mrna-12379 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 72,332.07 Da | 37.47 | 92.42 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 354 | 619 | 4.3E-33 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 5.2E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 188 | 8.2E-12 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 623 | 3.88E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 229 | 1.55E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 244 | 1.4E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 147 | 1.9E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 424 | 2.5E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 632 | 5.9E-44 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 128 | 150 | 7.018892 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 632 | 27.255312 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024460924.1 | - | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZLQ0 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G002000 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology