Basic Information
Locus ID:
nbisL1-mrna-12364
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000149F_pilon | 1434333 | 1436992 | - | nbisL1-mrna-12364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 73,403.53 Da | 39.85 | 103.70 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 378 | 641 | 8.91821E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 375 | 635 | 2.2E-36 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 64 | 8.3E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 213 | 8.93E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 376 | 638 | 3.93E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 446 | 7.3E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 140 | 2.4E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 653 | 4.0E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 227 | 3.6E-15 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 163 | 183 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 162 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 646 | 32.385956 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021647181.1 | probable inactive receptor kinase RLK902 [Hevea brasiliensis] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L9T5 | Uncharacterized protein MANES_06G003700 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology