Basic Information
Locus ID:
nbisL1-mrna-12345
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
synthase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 178852 | 179948 | + | nbisL1-mrna-12345 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 12,570.23 Da | 28.66 | 85.05 | -0.26 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29110.1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein. | 0 |
| RefSeq | XP_037497671.1 | LOW QUALITY PROTEIN: alpha-copaene synthase [Jatropha curcas] | 0 |
| Q94JS8 | (E)-beta-farnesene synthase OS=Citrus junos OX=135197 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6KAF6 | (-)-germacrene D synthase-like OS=Hevea brasiliensis OX=3981 GN=GH714_008558 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2449 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12345 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-22134, nbisL1-mrna-22135, nbisL1-mrna-22804 ... |