Basic Information
Locus ID:
nbisL1-mrna-12267
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6895072 | 6898712 | + | nbisL1-mrna-12267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 95,251.42 Da | 33.87 | 97.82 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 562 | 835 | 1.7232E-92 | - |
| Pfam | PF13855 | Leucine rich repeat | 364 | 421 | 7.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 319 | 357 | 0.017 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 85 | 141 | 1.5E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 57 | 9.4E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 557 | 830 | 1.1E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 537 | 832 | 7.42E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 308 | 1.36E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 321 | 433 | 1.93E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 634 | 850 | 5.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 318 | 3.8E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 319 | 443 | 3.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 521 | 633 | 1.9E-35 | - |
| SMART | SM00369 | LRR_typ_2 | 408 | 431 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 384 | 407 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 1.6E-4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 556 | 836 | 1.0E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 83 | 105 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 180 | 203 | 28.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 556 | 836 | 41.799198 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 562 | 584 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 681 | 693 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_050237128.1 | receptor-like kinase TMK4 [Mercurialis annua] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WI57 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G056800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology