Basic Information
Locus ID:
nbisL1-mrna-12228
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
methyltransferase DDB_G0268948
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000298F_pilon | 4627769 | 4629374 | + | nbisL1-mrna-12228 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 27,112.51 Da | 38.91 | 89.92 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02440 | AdoMet_MTases | 38 | 140 | 5.04205E-7 | - |
| Pfam | PF08241 | Methyltransferase domain | 39 | 134 | 5.5E-9 | IPR013216 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 3 | 167 | 1.11E-18 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 4 | 239 | 5.0E-40 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10830.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. | 0 |
| RefSeq | XP_021630564.1 | putative methyltransferase DDB_G0268948 [Manihot esculenta] | 0 |
| A0A2I2F2M2 | Methyltransferase cfoB OS=Aspergillus candidus OX=41067 GN=cfoB PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2K4F9 | Methyltransf_11 domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology