Basic Information
Locus ID:
nbisL1-mrna-12226
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 7214967 | 7220022 | - | nbisL1-mrna-12226 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 121,594.72 Da | 51.11 | 72.14 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 808 | 1065 | 3.65134E-109 | - |
| CDD | cd06410 | PB1_UP2 | 180 | 275 | 1.59636E-43 | - |
| Pfam | PF00564 | PB1 domain | 192 | 277 | 6.8E-18 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 804 | 1065 | 2.2E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 789 | 1064 | 3.37E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 192 | 284 | 2.29E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 195 | 278 | 1.0E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 795 | 889 | 1.7E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 890 | 1081 | 3.6E-52 | - |
| SMART | SM00666 | PB1_new | 191 | 278 | 1.7E-28 | IPR000270 |
| SMART | SM00220 | serkin_6 | 802 | 1068 | 4.2E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 802 | 1066 | 41.064228 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 927 | 939 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 808 | 833 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 921 | 939 | 2.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1036 | 1058 | 2.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 992 | 1014 | 2.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 884 | 897 | 2.7E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 773 | - | - |
| Coils | Coil | Coil | 573 | 593 | - | - |
| Coils | Coil | Coil | 530 | 550 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_021648742.1 | uncharacterized protein LOC110641358 [Hevea brasiliensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W961 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G150500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology