Basic Information
Locus ID:
nbisL1-mrna-12221
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001602F_pilon | 738451 | 744939 | - | nbisL1-mrna-12221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 48,169.87 Da | 35.34 | 110.46 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 96 | 250 | 5.0E-22 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 285 | 424 | 1.7E-21 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 123 | 264 | 2.4E-15 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 273 | 428 | 1.6E-19 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 77 | 427 | 6.3E-101 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 68 | 427 | 1.2E-111 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_048228859.1 | vacuolar cation/proton exchanger 3 [Ricinus communis] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2LPJ8 | Vacuolar cation/proton exchanger OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology