halophFGD

Basic Information

Locus ID: nbisL1-mrna-12217

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: Serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	25058120	25058515	-	nbisL1-mrna-12217

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.58	14,617.49 Da	33.91	85.42	-0.15

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	9	107	2.2E-5	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	9	120	1.37E-13	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	5	123	3.0E-20	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G34300.1	lectin protein kinase family protein.
RefSeq	XP_039000034.1	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Hibiscus syriacus]
Swiss-Prot	Q9XID3	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana OX=3702 GN=At1g34300 PE=1 SV=1
TrEMBL	A0A6A2Z194	G-type lectin S-receptor-like serine/threonine-protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111095pilonHSYRG00585 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg24184, jg37450
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000007873
Arecaceae	Cocos nucifera	1	contig69418415G000010
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-12217
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG04.804
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_5AG0404380, gene-QOZ80_5BG0452520 ... gene-QOZ80_9BG0715850
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.1HG0078150.1.CDS1 ... HORVU.MOREX.r3.3HG0311700.1.CDS1, HORVU.MOREX.r3.7HG0729370.1.CDS1
Poaceae	Lolium multiflorum	2	gene-QYE76_037780, gene-QYE76_062351
Poaceae	Sporobolus alterniflorus	3	Chr01G020440, Chr11G015080, Chr18G004720
Poaceae	Thinopyrum elongatum	5	Tel1E01G033000, Tel2E01G059800, Tel2E01G060300 ... Tel7E01G717000, Tel7E01G721100
Poaceae	Triticum dicoccoides	2	gene_TRIDC2AG043580, gene_TRIDC5BG002350
Poaceae	Triticum aestivum	14	TraesCS1A02G014400.1.cds1, TraesCS1B02G018500.1 ... TraesCS1D02G014000.1.cds1, TraesCS2A02G367500.1.cds1, TraesCS2B02G028300.1.cds1, TraesCS2B02G384800.1, TraesCS2D02G298400.1.cds1, TraesCS3D02G072600.1.cds1, TraesCS5A02G016400.1, TraesCS5D02G023300.1, TraesCS7A02G455700.1.cds1, TraesCS7A02G456900.1.cds1, TraesCS7A02G566300.1.cds1, TraesCS7B02G330200.1.cds1
Poaceae	Zea mays	2	Zm00001eb123820_P001, Zm00001eb266140_P001
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000006l.316